SeqAtlas

SEQATLAS LTD

Sequence work,
on your Mac.

Explore genomes, build constructs and review sequencing results in one Mac workspace. Core analyses run locally on your Mac.

Currently in development

Explore capabilitiesAbout the company
SeqAtlas development view of a circular 4.63 Mbp genome, with coloured annotations, project folders and annotation-layer controls.
Development view Circular genome map and annotation layers.

From a genome to a construct

A visual workspace for sequence work, with core analyses running on your Mac.

From genome to gene

Inspect gene structure and strand direction against genomic coordinates.

SeqAtlas development detail showing two annotated gene models on opposite strands, with exon blocks and connecting introns aligned to genomic coordinates.
Development detail Gene structure along genomic coordinates. Scroll sideways to inspect the detail.
Maps and annotations

Restriction analysis

A construct map, enzyme sites and cut details in the same view.

Restriction sites marked around a 5,040 bp plasmid beside a list of enzymes, cut positions and overhangs in the earlier SeqAtlas browser interface.
Earlier browser interface Restriction sites, cut positions and overhangs.
Enlarged detail: recognition spans, cut positions and overhangs. From the earlier SeqAtlas browser interface.
Enlarged detail: recognition spans, cut positions and overhangs. Full image

The earlier interface brings recognition spans, cut positions and overhangs together for the pictured construct.

See the development examples

Primer design

Candidate primers shown against the sequence they are intended to amplify.

Candidate forward and reverse primers mapped over hydN, with a selected PCR region highlighted in the earlier SeqAtlas browser interface.
Earlier browser interface Candidate primers and the highlighted PCR region.
Primer pair
Green and pink arrows show candidates on opposite strands.
PCR region
The teal highlight marks the selected sequence span.
Sequence context
The hydN annotation and coordinate scale remain in view.
Read about primer design

Guides in sequence context

See candidate positions and strand direction alongside the annotated sequence.

SeqAtlas development detail showing guide candidates as arrows along genomic coordinates, a selected candidate and the annotated sequence below.
Development view Guide positions and a selected candidate on the sequence map. Scroll sideways to inspect the detail.
CRISPR guide capabilities

The workflow we’re building

Keep the sequence visible through planning and review.

  1. Inspect the recordReview its map, annotations and regions of interest.
  2. Plan the experimentWork through primers, restriction sites and assembly choices.
  3. Review the resultCompare sequences and inspect differences.

Before release

Contact SEQATLAS LTD
Is the application available?
SeqAtlas for Mac is currently in development. No public application download, trial or subscription is available through this website.
What do the screenshots show?
The images are genuine development captures. Captions identify development views and the earlier browser interface. They do not represent a released Mac application.
When will it be released?
A public release date has not been announced. The development page explains the current scope and planned capabilities.